Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818074.1_cds_XP_016499443.1_13367
CDS Infomation

[gene=LOC107818046] [db_xref=GeneID:107818046] [protein=AUGMIN subunit 4-like isoform X2] [protein_id=XP_016499443.1] [location=join(28622..28750,28858..28905,29140..29265,30229..30579,30816..30915,31330..31375,31961..32054,32193..32264,32444..32502,33536..33604,33774..33885)] [gbkey=CDS]
Sequence

ATGGTAAGAGGGGTGGGTTCGCAAAACCTGCCGGCGGACGTCACACAGCTGATCGATCAG
TTGGAGCGCCACTGCTTAGCCCCTGATGGATCTCTCGTCTCCAAATCCGCTTACTTCGAT
CGCCAACTCGCGAGAGAAGAAATGTCAAAGGAGAGACAGCGCTATTTGGAATCCTTAGCA
GTATATATTGAGGCGACCGCGATGGTAGAAGATTACCAGCAAGCCATTTCTGTGGCCAAT
CTTGGTGGTATTCGAGATGTGCAGGGTTTATACTCTCAATTGGGCTTGAAAAACCCTCCT
CAGGTTTATGAGGCTCTTGAGCATAGGATGGTTGTTGCTGAAGCAGCTCAGAGATTGAGG
CTTCCACTTATCTCCAAAGACGGTGAGATTCACGAGGATGAAATTGAAAAATGGAGTGTA
CTGTCGAGATGTTCTAGTGATAGCACAAGCACCAGCATCACATTAAGCTCGAGCTCAAAC
TCAACTTATCAAACCAATGCATCTGTAATTGGAGCTGTTCCTGCAGCAAGCAGTGCTTCC
ACTACCGGTACAACTGATGCAACAGAACCAGATGTTGGTGGTGTTCCCAATCGATTCCTT
GGAGTTACGCCTGCATATTTATGGCAAACTCAACTACATCAGATGTCATCAGTGGATGTG
GCAGAATACCAGAGATTGCTTTCACGTGAGATTGGAAGCCGGTTGGATGCTAAATGTGAT
AAGTTATCTAATGCAGTTGCTATTGATGACATTGATATATCTGCTGGCAATCAAAGTTCA
GCTGCCCGGCTTCCAGAAAGGGTAAAGTTGATCATTGAGGAGATTGAAAGAGAAGAAACA
GCATGGCGTGAGGATTTATATTCATCTAACAGAAAATTTGCAGAATACTATAATGTTTTG
GAGCAGATCCTTGGTGTGCTCATTAAGCTTGTCAAAGATATAAAGTTGGACCATCAACAT
AAATATGATGAACTGCAAAAGACGTGGCTGTGCAAAAGATGTGAGACAATGAGGGCAAAA
TTAAGAGTTCTGGAACATATTCTCCTACTTGAGACGTATACCCCGGAAACTATCCCTGCA
CTTCACAAAATAAGTTGGGTGGATCATCTTCAAATTTACTACATTTCCATGATTTGCTTA
CGCTTGTTCCCTGGACTACCCCCTCATCCAGAAAATCATGGAAATTTGAACATTCAAAGA
TTGTAG

Peptide Sequence

PEP ID

XP_016499443.1
PEP Infomation

PREDICTED: AUGMIN subunit 4-like isoform X2 [Nicotiana tabacum]
Sequence

MVRGVGSQNLPADVTQLIDQLERHCLAPDGSLVSKSAYFDRQLAREEMSKERQRYLESLA
VYIEATAMVEDYQQAISVANLGGIRDVQGLYSQLGLKNPPQVYEALEHRMVVAEAAQRLR
LPLISKDGEIHEDEIEKWSVLSRCSSDSTSTSITLSSSSNSTYQTNASVIGAVPAASSAS
TTGTTDATEPDVGGVPNRFLGVTPAYLWQTQLHQMSSVDVAEYQRLLSREIGSRLDAKCD
KLSNAVAIDDIDISAGNQSSAARLPERVKLIIEEIEREETAWREDLYSSNRKFAEYYNVL
EQILGVLIKLVKDIKLDHQHKYDELQKTWLCKRCETMRAKLRVLEHILLLETYTPETIPA
LHKISWVDHLQIYYISMICLRLFPGLPPHPENHGNLNIQRL

Transcript Sequence

Gene sequence data has not been registered.